IL_4V6A_348
3D structure
- PDB id
- 4V6A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of EF-P bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAG*CUCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6A_348 not in the Motif Atlas
- Geometric match to IL_4WF9_044
- Geometric discrepancy: 0.2791
- The information below is about IL_4WF9_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
4V6A|1|DA|G|862
4V6A|1|DA|A|863
4V6A|1|DA|G|864
*
4V6A|1|DA|C|912
4V6A|1|DA|U|913
4V6A|1|DA|C|914
4V6A|1|DA|C|915
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D0
- 50S ribosomal protein L27
- Chain DB
- 5S ribosomal RNA; 5S rRNA
- Chain DQ
- 50S ribosomal protein L16
- Chain DZ
- 50S ribosomal protein L25
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