IL_4V6E_202

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

UA*UUG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6E_202 not in the Motif Atlas

Geometric match to IL_8P9A_328

Geometric discrepancy: 0.3909

The information below is about IL_8P9A_328

Detailed Annotation

Single stack bend with bulge

Broad Annotation

Single stack bend with bulge

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4V6E|1|CA|U|458
4V6E|1|CA|A|459
*
4V6E|1|CA|U|472
4V6E|1|CA|U|473
4V6E|1|CA|G|474

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CP

30S ribosomal protein S16