IL_4V6F_132

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCAAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6F_132 not in the Motif Atlas

Geometric match to IL_5J7L_018

Geometric discrepancy: 0.0855

The information below is about IL_5J7L_018

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

4V6F|1|BA|G|371
4V6F|1|BA|C|372
4V6F|1|BA|A|373
4V6F|1|BA|A|374
4V6F|1|BA|U|375
*
4V6F|1|BA|A|389
4V6F|1|BA|C|390

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BS

30S ribosomal protein S16