IL_4V6F_188

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

4V6F|1|CA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6F_188 not in the Motif Atlas

Homologous match to IL_4LFB_009

Geometric discrepancy: 0.1184

The information below is about IL_4LFB_009

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_12745.1

Basepair signature

cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

1

Unit IDs

4V6F|1|CA|G|148
4V6F|1|CA|A|149
4V6F|1|CA|C|150
4V6F|1|CA|A|151
4V6F|1|CA|A|152
4V6F|1|CA|C|153
*
4V6F|1|CA|G|168
4V6F|1|CA|C|169
4V6F|1|CA|U|170
4V6F|1|CA|A|171
4V6F|1|CA|A|172
4V6F|1|CA|U|173
4V6F|1|CA|C|174

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CW

30S ribosomal protein S20