IL_4V6F_367
3D structure
- PDB id
- 4V6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation complex of the 70S ribosome with three tRNAs and mRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- ACGUGGCUACCUGCGAUAAGC*GAUGU
- Length
- 26 nucleotides
- Bulged bases
- 4V6F|1|DA|U|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6F_367 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.2529
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
4V6F|1|DA|A|56
4V6F|1|DA|C|57
4V6F|1|DA|G|58
4V6F|1|DA|U|59
4V6F|1|DA|G|60
4V6F|1|DA|G|61
4V6F|1|DA|C|62
4V6F|1|DA|U|63
4V6F|1|DA|A|64
4V6F|1|DA|C|65
4V6F|1|DA|C|66
4V6F|1|DA|U|67
4V6F|1|DA|G|68
4V6F|1|DA|C|69
4V6F|1|DA|G|70
4V6F|1|DA|A|71
4V6F|1|DA|U|72
4V6F|1|DA|A|73
4V6F|1|DA|A|74
4V6F|1|DA|G|75
4V6F|1|DA|C|76
*
4V6F|1|DA|G|110
4V6F|1|DA|A|111
4V6F|1|DA|U|112
4V6F|1|DA|G|113
4V6F|1|DA|U|114
Current chains
- Chain DA
- 23S RRNA
Nearby chains
- Chain D7
- 50S RIBOSOMAL PROTEIN L34
- Chain DT
- 50S RIBOSOMAL PROTEIN L23
- Chain DW
- 50S RIBOSOMAL PROTEIN L29
Coloring options: