Motif IL_44998.1 Version IL_44998.1 of this group appears in releases 3.80 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | break | 21 | 22 | 23 | 24 | 25 | 1-25 | 2-15 | 3-14 | 3-17 | 4-13 | 12-18 | 14-17 | 15-16 | 19-22 | 20-21 | |||||||||||||||||||||||||
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1 | IL_8C3A_150 | 8C3A | 0.0000 | 1 | 4 | 5.8S rRNA | A | 44 | C | 45 | G | 46 | C | 47 | A | 48 | G | 49 | C | 50 | G | 51 | A | 52 | A | 53 | A | 54 | U | 55 | G | 56 | C | 57 | G | 58 | A | 59 | A | 61 | C | 62 | G | 63 | U | 64 | * | A | 96 | A | 97 | U | 98 | C | 99 | U | 100 | cWW | cWW | cWW | tsS | cWW | cWW | ncSs | cWW | cWW | |
2 | IL_5TBW_144 | 5TBW | 0.0659 | 1 | 4 | 5.8S rRNA | A | 44 | C | 45 | G | 46 | C | 47 | A | 48 | G | 49 | C | 50 | G | 51 | A | 52 | A | 53 | A | 54 | U | 55 | G | 56 | C | 57 | G | 58 | A | 59 | A | 61 | C | 62 | G | 63 | U | 64 | * | A | 96 | A | 97 | U | 98 | C | 99 | U | 100 | cWW | cWW | cWW | tsS | cWW | cWW | ncsS | ncSs | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
ACGCAGCGAAAUGCGAUACGU*AAUCU | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
CGCAGCGAAAUGCGAUACG*AUC | 2 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 |
---|---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Heat map statistics
- Min 0.07 | Avg 0.03 | Max 0.07
Coloring options: