IL_4V6I_085
3D structure
- PDB id
- 4V6I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.8 Å
Loop
- Sequence
- GCC*GUCUCU*C
- Length
- 10 nucleotides
- Bulged bases
- 4V6I|1|DA|U|479, 4V6I|1|DA|C|480
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6I|1|DA|G|452
4V6I|1|DA|C|453
4V6I|1|DA|C|454
*
4V6I|1|DA|G|476
4V6I|1|DA|U|481
4V6I|1|DA|C|482
4V6I|1|DA|U|479
4V6I|1|DA|C|480
4V6I|1|DA|U|481
*
4V6I|1|DA|C|482
Current chains
- Chain DA
- 25S rRNA
Nearby chains
No other chains within 10ÅColoring options: