IL_4V6I_114

3D structure

PDB id

4V6I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

8.8 Å

Loop

Sequence

GUUCCGGG*UGACCU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6I|1|DA|G|1013
4V6I|1|DA|U|1014
4V6I|1|DA|U|1015
4V6I|1|DA|C|1016
4V6I|1|DA|C|1017
4V6I|1|DA|G|1018
4V6I|1|DA|G|1019
4V6I|1|DA|G|1020
*
4V6I|1|DA|U|1034
4V6I|1|DA|G|1035
4V6I|1|DA|A|1036
4V6I|1|DA|C|1037
4V6I|1|DA|C|1038
4V6I|1|DA|U|1039

Current chains

Chain DA

25S rRNA

Nearby chains