IL_4V6K_026

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

UGAAUUC*GUUAUCA

Length

14 nucleotides

Bulged bases

4V6K|1|AB|U|846, 4V6K|1|AB|U|931

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|U|842
4V6K|1|AB|G|843
4V6K|1|AB|A|844
4V6K|1|AB|A|845
4V6K|1|AB|U|846
4V6K|1|AB|U|847
4V6K|1|AB|C|848
*
4V6K|1|AB|G|930
4V6K|1|AB|U|931
4V6K|1|AB|U|932
4V6K|1|AB|A|933
4V6K|1|AB|U|934
4V6K|1|AB|C|935
4V6K|1|AB|A|936

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AX

50S ribosomal protein L27

Chain Aa

50S ribosomal protein L30

Chain Af

50S ribosomal protein L35