IL_4V6K_038

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

GUUAAGUG*CUAAAC

Length

14 nucleotides

Bulged bases

4V6K|1|AB|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|G|1017
4V6K|1|AB|U|1018
4V6K|1|AB|U|1019
4V6K|1|AB|A|1020
4V6K|1|AB|A|1021
4V6K|1|AB|G|1022
4V6K|1|AB|U|1023
4V6K|1|AB|G|1024
*
4V6K|1|AB|C|1140
4V6K|1|AB|U|1141
4V6K|1|AB|A|1142
4V6K|1|AB|A|1143
4V6K|1|AB|A|1144
4V6K|1|AB|C|1145

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AK

50S ribosomal protein L13

Chain Ag

50S ribosomal protein L36