IL_4V6K_094

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

CUCA*UACG(CH)GAG

Length

12 nucleotides

Bulged bases

4V6K|1|AB|A|2572, 4V6K|1|AB|C|2573, 4V6K|1|AB|G|2576, 4V6K|1|AB|A|2577

QA status

Modified nucleotides: CH

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|C|2510
4V6K|1|AB|U|2511
4V6K|1|AB|C|2512
4V6K|1|AB|A|2513
*
4V6K|1|AB|U|2571
4V6K|1|AB|A|2572
4V6K|1|AB|C|2573
4V6K|1|AB|G|2574
4V6K|1|AB|CH|2575
4V6K|1|AB|G|2576
4V6K|1|AB|A|2577
4V6K|1|AB|G|2578

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AK

50S ribosomal protein L13

Chain Ac

50S ribosomal protein L32