IL_4V6K_161
3D structure
- PDB id
- 4V6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.25 Å
Loop
- Sequence
- CGACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6K_161 not in the Motif Atlas
- Homologous match to IL_5J7L_056
- Geometric discrepancy: 0.153
- The information below is about IL_5J7L_056
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V6K|1|BA|C|1259
4V6K|1|BA|G|1260
4V6K|1|BA|A|1261
4V6K|1|BA|C|1262
4V6K|1|BA|C|1263
*
4V6K|1|BA|G|1272
4V6K|1|BA|C|1273
4V6K|1|BA|A|1274
4V6K|1|BA|A|1275
4V6K|1|BA|G|1276
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain Ab
- 50S ribosomal protein L31
- Chain BG
- 30S ribosomal protein S3
- Chain BN
- 30S ribosomal protein S10
- Chain BR
- 30S ribosomal protein S14
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