3D structure

PDB id
4V6L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into cognate vs. near-cognate discrimination during decoding.
Experimental method
ELECTRON MICROSCOPY
Resolution
13.2 Å

Loop

Sequence
GGU*AUGACC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V6L|1|AA|G|292
4V6L|1|AA|G|293
4V6L|1|AA|U|294
*
4V6L|1|AA|A|303
4V6L|1|AA|U|304
4V6L|1|AA|G|305
4V6L|1|AA|A|306
4V6L|1|AA|C|307
4V6L|1|AA|C|308

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AP
30S ribosomal protein S12
Chain AT
30S ribosomal protein S16

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.8769 s