IL_4V6L_028

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

UGUGAAAUCC*GAACUGCA

Length

18 nucleotides

Bulged bases

4V6L|1|AA|U|632

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|AA|U|603
4V6L|1|AA|G|604
4V6L|1|AA|U|605
4V6L|1|AA|G|606
4V6L|1|AA|A|607
4V6L|1|AA|A|608
4V6L|1|AA|A|609
4V6L|1|AA|U|610
4V6L|1|AA|C|611
4V6L|1|AA|C|612
*
4V6L|1|AA|G|628
4V6L|1|AA|A|629
4V6L|1|AA|A|630
4V6L|1|AA|C|631
4V6L|1|AA|U|632
4V6L|1|AA|G|633
4V6L|1|AA|C|634
4V6L|1|AA|A|635

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AH

30S ribosomal protein S4

Chain AL

30S ribosomal protein S8

Chain AT

30S ribosomal protein S16

Chain AU

30S ribosomal protein S17