IL_4V6L_092
3D structure
- PDB id
- 4V6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.2 Å
Loop
- Sequence
- UUUC*GAUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6L_092 not in the Motif Atlas
- Geometric match to IL_4EYA_008
- Geometric discrepancy: 0.293
- The information below is about IL_4EYA_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V6L|1|BB|U|870
4V6L|1|BB|U|871
4V6L|1|BB|U|872
4V6L|1|BB|C|873
*
4V6L|1|BB|G|904
4V6L|1|BB|A|905
4V6L|1|BB|U|906
4V6L|1|BB|G|907
Current chains
- Chain BB
- 50S ribosomal RNA 23S
Nearby chains
- Chain BN
- 50S ribosomal protein L16
Coloring options: