IL_4V6L_099

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GUUAAGUG*CUAAAC

Length

14 nucleotides

Bulged bases

4V6L|1|BB|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|G|1017
4V6L|1|BB|U|1018
4V6L|1|BB|U|1019
4V6L|1|BB|A|1020
4V6L|1|BB|A|1021
4V6L|1|BB|G|1022
4V6L|1|BB|U|1023
4V6L|1|BB|G|1024
*
4V6L|1|BB|C|1140
4V6L|1|BB|U|1141
4V6L|1|BB|A|1142
4V6L|1|BB|A|1143
4V6L|1|BB|A|1144
4V6L|1|BB|C|1145

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain BK

50S ribosomal protein L13

Chain Bg

50S ribosomal protein L36