IL_4V6L_100

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GGGAAAC*GGAAGAUGUAACGGGGC

Length

24 nucleotides

Bulged bases

4V6L|1|BB|A|1127, 4V6L|1|BB|U|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|G|1024
4V6L|1|BB|G|1025
4V6L|1|BB|G|1026
4V6L|1|BB|A|1027
4V6L|1|BB|A|1028
4V6L|1|BB|A|1029
4V6L|1|BB|C|1030
*
4V6L|1|BB|G|1124
4V6L|1|BB|G|1125
4V6L|1|BB|A|1126
4V6L|1|BB|A|1127
4V6L|1|BB|G|1128
4V6L|1|BB|A|1129
4V6L|1|BB|U|1130
4V6L|1|BB|G|1131
4V6L|1|BB|U|1132
4V6L|1|BB|A|1133
4V6L|1|BB|A|1134
4V6L|1|BB|C|1135
4V6L|1|BB|G|1136
4V6L|1|BB|G|1137
4V6L|1|BB|G|1138
4V6L|1|BB|G|1139
4V6L|1|BB|C|1140

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain BE

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13

Chain BN

50S ribosomal protein L16

Chain Bg

50S ribosomal protein L36