IL_4V6L_148

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

4V6L|1|BB|U|2111, 4V6L|1|BB|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|G|2110
4V6L|1|BB|U|2111
4V6L|1|BB|G|2112
4V6L|1|BB|U|2113
4V6L|1|BB|A|2114
4V6L|1|BB|G|2115
4V6L|1|BB|G|2116
4V6L|1|BB|A|2117
4V6L|1|BB|U|2118
4V6L|1|BB|A|2119
4V6L|1|BB|G|2120
*
4V6L|1|BB|C|2178
4V6L|1|BB|C|2179

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain AO

30S ribosomal protein S11

Chain BC

50S ribosomal protein L1