IL_4V6L_157

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

CUCA*UACG(CH)GAG

Length

12 nucleotides

Bulged bases

4V6L|1|BB|A|2572, 4V6L|1|BB|C|2573, 4V6L|1|BB|G|2576, 4V6L|1|BB|A|2577

QA status

Modified nucleotides: CH

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|C|2510
4V6L|1|BB|U|2511
4V6L|1|BB|C|2512
4V6L|1|BB|A|2513
*
4V6L|1|BB|U|2571
4V6L|1|BB|A|2572
4V6L|1|BB|C|2573
4V6L|1|BB|G|2574
4V6L|1|BB|CH|2575
4V6L|1|BB|G|2576
4V6L|1|BB|A|2577
4V6L|1|BB|G|2578

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain BE

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13

Chain Bc

50S ribosomal protein L32