IL_4V6L_171
3D structure
- PDB id
- 4V6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.2 Å
Loop
- Sequence
- UGG*CACA
- Length
- 7 nucleotides
- Bulged bases
- 4V6L|1|AA|A|1227
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6L_171 not in the Motif Atlas
- Geometric match to IL_5B2P_002
- Geometric discrepancy: 0.3948
- The information below is about IL_5B2P_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 79
Unit IDs
4V6L|1|AA|U|952
4V6L|1|AA|G|953
4V6L|1|AA|G|954
*
4V6L|1|AA|C|1226
4V6L|1|AA|A|1227
4V6L|1|AA|C|1228
4V6L|1|AA|A|1229
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AE
- Transfer RNA; tRNA
- Chain AM
- 30S ribosomal protein S9
- Chain AQ
- 30S ribosomal protein S13
- Chain AW
- 30S ribosomal protein S19
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