IL_4V6L_177

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

UGAAUUCA*UGUUAUCA

Length

16 nucleotides

Bulged bases

4V6L|1|BB|U|846, 4V6L|1|BB|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|U|842
4V6L|1|BB|G|843
4V6L|1|BB|A|844
4V6L|1|BB|A|845
4V6L|1|BB|U|846
4V6L|1|BB|U|847
4V6L|1|BB|C|848
4V6L|1|BB|A|849
*
4V6L|1|BB|U|929
4V6L|1|BB|G|930
4V6L|1|BB|U|931
4V6L|1|BB|U|932
4V6L|1|BB|A|933
4V6L|1|BB|U|934
4V6L|1|BB|C|935
4V6L|1|BB|A|936

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain BX

50S ribosomal protein L27

Chain Ba

50S ribosomal protein L30

Chain Bf

50S ribosomal protein L35