IL_4V6L_187

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

4V6L|1|BB|A|2158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|G|2124
4V6L|1|BB|G|2125
4V6L|1|BB|A|2126
4V6L|1|BB|G|2127
4V6L|1|BB|G|2128
4V6L|1|BB|C|2129
4V6L|1|BB|U|2130
4V6L|1|BB|U|2131
4V6L|1|BB|U|2132
4V6L|1|BB|G|2133
4V6L|1|BB|A|2134
4V6L|1|BB|A|2135
4V6L|1|BB|G|2136
4V6L|1|BB|U|2137
*
4V6L|1|BB|A|2154
4V6L|1|BB|U|2155
4V6L|1|BB|G|2156
4V6L|1|BB|G|2157
4V6L|1|BB|A|2158
4V6L|1|BB|G|2159
4V6L|1|BB|C|2160
4V6L|1|BB|C|2161
4V6L|1|BB|G|2162
4V6L|1|BB|A|2163
4V6L|1|BB|C|2164
4V6L|1|BB|C|2165
4V6L|1|BB|U|2166
4V6L|1|BB|U|2167
4V6L|1|BB|G|2168
4V6L|1|BB|A|2169
4V6L|1|BB|A|2170
4V6L|1|BB|A|2171
4V6L|1|BB|U|2172
4V6L|1|BB|A|2173
4V6L|1|BB|C|2174

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain AO

30S ribosomal protein S11

Chain BC

50S ribosomal protein L1