IL_4V6L_193

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

4V6L|1|AA|G|251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6L_193 not in the Motif Atlas

Geometric match to IL_5Y58_001

Geometric discrepancy: 0.2685

The information below is about IL_5Y58_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_59877.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V6L|1|AA|U|249
4V6L|1|AA|A|250
4V6L|1|AA|G|251
4V6L|1|AA|U|252
*
4V6L|1|AA|A|274
4V6L|1|AA|G|275

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AU

30S ribosomal protein S17