IL_4V6M_104
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- GGGG*CUUAC
- Length
- 9 nucleotides
- Bulged bases
- 4V6M|1|B8|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_104 not in the Motif Atlas
- Geometric match to IL_6JDV_002
- Geometric discrepancy: 0.2782
- The information below is about IL_6JDV_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
4V6M|1|B8|G|880
4V6M|1|B8|G|881
4V6M|1|B8|G|882
4V6M|1|B8|G|883
*
4V6M|1|B8|C|893
4V6M|1|B8|U|894
4V6M|1|B8|U|895
4V6M|1|B8|A|896
4V6M|1|B8|C|897
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AS
- 30S ribosomal protein S19
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