RNA 3D Hub //

4V6M Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V6M_0011/AA/12:22No text annotation
homologous
HL_4LFB_001
HL_89881.5
HL_4V6M_0021/AA/83:86No text annotation
geometric
HL_6U8D_003
HL_32346.3
HL_4V6M_0031/AA/158:163GNRA
homologous
HL_5J7L_003
HL_37824.7
HL_4V6M_0041/AA/186:191GNRA
homologous
HL_5J7L_004
HL_37824.7
HL_4V6M_0051/AA/207:212UNCG
homologous
HL_5J7L_005
HL_34617.5
HL_4V6M_0061/AA/259:267GNRA related
homologous
HL_5J7L_006
HL_84299.4
HL_4V6M_0071/AA/296:301GNRA
homologous
HL_5J7L_007
HL_37824.7
HL_4V6M_0081/AA/320:333No text annotation
homologous
HL_4LFB_008
HL_81205.3
HL_4V6M_0091/AA/342:347UNCG
homologous
HL_6CZR_080
NA
HL_4V6M_0101/AA/379:384GNRA
homologous
HL_5J7L_010
HL_37824.7
HL_4V6M_0111/AA/419:424UNCG
homologous
HL_4LFB_011
HL_34617.5
HL_4V6M_0121/AA/462:470No text annotation
HL_4V6M_0131/AA/522:527Externally structured
geometric
HL_5TBW_022
NA
HL_4V6M_0141/AA/617:623No text annotation
homologous
HL_5J7L_014
HL_10453.3
HL_4V6M_0151/AA/689:698No text annotation
homologous
HL_5J7L_015
HL_75293.5
HL_4V6M_0161/AA/726:731GNRA
homologous
HL_5J7L_016
HL_37824.7
HL_4V6M_0171/AA/786:796No text annotation
homologous
HL_6CZR_088
NA
HL_4V6M_0181/AA/840:846No text annotation
geometric
HL_4O26_001
HL_35941.1
HL_4V6M_0191/AA/862:867GNRA
homologous
HL_5J7L_019
HL_37824.7
HL_4V6M_0201/AA/897:902GNRA
homologous
HL_4LFB_020
HL_37824.7
HL_4V6M_0211/AA/963:972No text annotation
homologous
HL_4LFB_021
HL_50779.4
HL_4V6M_0221/AA/1012:1017GNRA
homologous
HL_4LFB_022
HL_37824.7
HL_4V6M_0231/AA/1028:1033UNCG
geometric
HL_1I6U_001
HL_34617.5
HL_4V6M_0241/AA/1076:1081GNRA
homologous
HL_5J7L_023
HL_37824.7
HL_4V6M_0251/AA/1089:1096T-loop related
homologous
HL_4LFB_025
HL_77436.5
HL_4V6M_0261/AA/1134:1140No text annotation
homologous
HL_5J7L_025
HL_87954.2
HL_4V6M_0271/AA/1165:1171GNRA
homologous
HL_4LFB_027
HL_37824.7
HL_4V6M_0281/AA/1265:1270GNRA
homologous
HL_4LFB_028
HL_37824.7
HL_4V6M_0291/AA/1314:1323T-loop with 3 stacked bulged bases
homologous
HL_5J7L_028
HL_02887.3
HL_4V6M_0301/AA/1356:1366No text annotation
homologous
HL_4LFB_030
HL_06226.4
HL_4V6M_0311/AA/1449:1454UNCG
homologous
HL_5J7L_030
HL_34617.5
HL_4V6M_0321/AA/1515:1520GNRA
homologous
HL_6CZR_103
NA
HL_4V6M_0331/AV/13:23No text annotation
homologous
HL_5HR6_001
HL_78347.4
HL_4V6M_0341/AV/32:40tRNA anticodon loop
geometric
HL_4V9Q_214
HL_06059.5
HL_4V6M_0351/AV/54:62T-loop with 2 stacked bulged bases
homologous
HL_3ZGZ_003
HL_28252.6
HL_4V6M_1071/B7/34:48No text annotation
homologous
HL_5J7L_215
HL_97756.2
HL_4V6M_0361/B7/38:44No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_4V6M_0371/B7/86:90Mini UNCG
homologous
HL_5J7L_204
HL_48778.2
HL_4V6M_0381/B8/59:68No text annotation
homologous
HL_5J7L_134
HL_35677.3
HL_4V6M_0391/B8/87:95No text annotation
homologous
HL_5J7L_135
HL_80241.1
HL_4V6M_0401/B8/123:128No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_4V6M_0411/B8/137:142UNCG
geometric
HL_1NBS_006
HL_34617.5
HL_4V6M_0421/B8/158:168No text annotation
HL_4V6M_0431/B8/194:201No text annotation
geometric
HL_7RQB_006
NA
HL_4V6M_0441/B8/225:230No text annotation
homologous
HL_5J7L_140
HL_62934.1
HL_4V6M_0451/B8/246:252No text annotation
homologous
HL_4WF9_008
HL_37369.2
HL_4V6M_0461/B8/305:312T-loop with 2 stacked bulged bases
homologous
HL_5J7L_142
HL_01609.3
HL_4V6M_0471/B8/319:323No text annotation
homologous
HL_5J7L_143
HL_75660.5
HL_4V6M_0481/B8/327:335T-loop with unstacked turn
homologous
HL_4WF9_012
HL_27670.2
HL_4V6M_0491/B8/382:392No text annotation
homologous
HL_5J7L_145
HL_91503.7
HL_4V6M_0501/B8/410:417Pseudoknot geometry
homologous
HL_5J7L_146
HL_30680.3
HL_4V6M_0511/B8/462:467GNRA
homologous
HL_7RQB_015
NA
HL_4V6M_0521/B8/487:493GNRA
homologous
HL_9DFE_015
HL_37824.7
HL_4V6M_0531/B8/543:550No text annotation
geometric
HL_6U8D_003
HL_32346.3
HL_4V6M_0541/B8/566:575T-loop with 2 stacked bulged bases
geometric
HL_5J7L_150
HL_28252.6
HL_4V6M_0551/B8/611:617No text annotation
homologous
HL_5J7L_151
HL_80922.2
HL_4V6M_0561/B8/629:634GNRA
homologous
HL_5J7L_152
HL_37824.7
HL_4V6M_0571/B8/641:647GNRA
homologous
HL_4WF9_021
HL_37824.7
HL_4V6M_0581/B8/712:719GNRA wlth tandem sheared
homologous
HL_5J7L_154
HL_81538.2
HL_4V6M_0591/B8/744:753No text annotation
homologous
HL_4WF9_023
HL_88205.2
HL_4V6M_0601/B8/779:785No text annotation
geometric
HL_7A0S_007
HL_53890.2
HL_4V6M_0611/B8/826:831No text annotation
homologous
HL_7RQB_025
NA
HL_4V6M_0621/B8/885:891No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_4V6M_0631/B8/955:962GNRA
homologous
HL_4WF9_027
HL_37824.7
HL_4V6M_0641/B8/978:985No text annotation
homologous
HL_5J7L_160
HL_42998.2
HL_4V6M_0651/B8/1064:1074No text annotation
homologous
HL_5J7L_161
HL_19210.3
HL_4V6M_0661/B8/1092:1099No text annotation
homologous
HL_7RQB_030
NA
HL_4V6M_0671/B8/1172:1177No text annotation
geometric
HL_7A0S_007
HL_53890.2
HL_4V6M_0681/B8/1222:1227GNRA
homologous
HL_5J7L_164
HL_37824.7
HL_4V6M_0691/B8/1281:1289T-loop with 2 stacked bulged bases
homologous
HL_5J7L_165
HL_28252.6
HL_4V6M_0701/B8/1324:1330Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_166
HL_57176.2
HL_4V6M_0711/B8/1363:1368GNRA
homologous
HL_5J7L_167
HL_37824.7
HL_4V6M_0721/B8/1389:1398No text annotation
homologous
HL_7RQB_036
NA
HL_4V6M_0731/B8/1450:1461No text annotation
geometric
HL_8G9Z_001
HL_75660.5
HL_4V6M_0741/B8/1492:1498Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_170
HL_57176.2
HL_4V6M_0751/B8/1533:1538UNCG
homologous
HL_5J7L_171
HL_34617.5
HL_4V6M_0761/B8/1565:1568Mini UNCG
homologous
HL_7A0S_039
HL_48778.2
HL_4V6M_0771/B8/1612:1619No text annotation
homologous
HL_7RQB_040
NA
HL_4V6M_0781/B8/1630:1636GNRA
homologous
HL_5J7L_174
HL_37824.7
HL_4V6M_0791/B8/1691:1696UNCG
homologous
HL_5J7L_175
HL_34617.5
HL_4V6M_0801/B8/1728:1731No text annotation
homologous
HL_5J7L_176
HL_32346.3
HL_4V6M_0811/B8/1752:1756No text annotation
homologous
HL_5J7L_177
HL_80709.3
HL_4V6M_0821/B8/1777:1787No text annotation
homologous
HL_4WF9_043
HL_01962.2
HL_4V6M_0831/B8/1806:1811GNRA related
homologous
HL_5J7L_179
HL_04783.2
HL_4V6M_0841/B8/1868:1873GNRA variation
homologous
HL_5J7L_180
HL_37824.7
HL_4V6M_0851/B8/1910:1920No text annotation
geometric
HL_5TBW_049
NA
HL_4V6M_0861/B8/1949:1957No text annotation
homologous
HL_5J7L_182
HL_20167.2
HL_4V6M_0871/B8/2027:2036No text annotation
homologous
HL_4WF9_047
HL_61996.2
HL_4V6M_0881/B8/2143:2148No text annotation
geometric
HL_4O26_001
HL_35941.1
HL_4V6M_0891/B8/2209:2215No text annotation
homologous
HL_5J7L_185
HL_49922.4
HL_4V6M_0901/B8/2248:2256No text annotation
homologous
HL_7A0S_052
HL_85367.2
HL_4V6M_0911/B8/2264:2276No text annotation
homologous
HL_4WF9_050
HL_91939.2
HL_4V6M_0921/B8/2303:2313No text annotation
geometric
HL_8VTW_010
NA
HL_4V6M_0931/B8/2324:2331Pseudoknot geometry
homologous
HL_5J7L_189
HL_93324.4
HL_4V6M_0941/B8/2356:2361GNRA
homologous
HL_5J7L_190
HL_37824.7
HL_4V6M_0951/B8/2374:2379GNRA
homologous
HL_5J7L_191
HL_37824.7
HL_4V6M_0961/B8/2404:2413No text annotation
homologous
HL_7A0S_058
HL_53454.2
HL_4V6M_0971/B8/2471:2479No text annotation
homologous
HL_4WF9_056
HL_32735.2
HL_4V6M_0981/B8/2528:2535No text annotation
homologous
HL_7RQB_061
NA
HL_4V6M_0991/B8/2551:2557No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_4V6M_1001/B8/2594:2599GNRA
homologous
HL_5J7L_196
HL_37824.7
HL_4V6M_1011/B8/2658:2663GNRA
geometric
HL_5D5L_001
HL_37824.7
HL_4V6M_1021/B8/2701:2706Ribsomal LSU H95
homologous
HL_5J7L_198
HL_65794.5
HL_4V6M_1031/B8/2745:2759No text annotation
homologous
HL_5J7L_199
HL_74055.2
HL_4V6M_1041/B8/2796:2800Mini UNCG
geometric
HL_4YAZ_004
HL_48778.2
HL_4V6M_1051/B8/2819:2827No text annotation
homologous
HL_5J7L_201
HL_64690.6
HL_4V6M_1061/B8/2856:2861GNRA
homologous
HL_5J7L_202
HL_37824.7

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V6M_0011/AA/30:32,
1/AA/552:553		Single bulged G
homologous
IL_6CZR_113
NA
IL_4V6M_0021/AA/44:45,
1/AA/396:398		Single bulged A
homologous
IL_5J7L_002
IL_31462.5
IL_4V6M_0031/AA/47:52,
1/AA/359:361		No text annotation
homologous
IL_4LFB_003
IL_14177.2
IL_4V6M_0041/AA/54:56,
1/AA/356:357		Minor groove platform
homologous
IL_5J7L_004
IL_51454.2
IL_4V6M_0051/AA/63:66,
1/AA/103:104		Multiple bulged bases
homologous
IL_4LFB_005
IL_82107.4
IL_4V6M_0061/AA/67:69,
1/AA/99:102		Minor groove platform with extra cWW
homologous
IL_5J7L_006
IL_90351.1
IL_4V6M_0071/AA/70:73,
1/AA/97:98		Minor groove platform
homologous
IL_5J7L_007
IL_15052.4
IL_4V6M_0081/AA/75:76,
1/AA/93:95		Major groove intercalation
geometric
IL_5J7L_352
IL_66635.5
IL_4V6M_0091/AA/128:131,
1/AA/231:233		Isolated non-canonical cWW pair
homologous
IL_5J7L_009
IL_57744.1
IL_4V6M_0101/AA/132:136,
1/AA/227:230		No text annotation
homologous
IL_4LFB_008
IL_64231.5
IL_4V6M_0111/AA/144:146,
1/AA/176:178		Isolated cWH basepair
homologous
IL_5J7L_011
IL_10167.5
IL_4V6M_0121/AA/147:153,
1/AA/168:175		tWH-tWH-tHW-tHW
homologous
IL_5J7L_012
IL_80604.6
IL_4V6M_0131/AA/203:206,
1/AA/213:214		Minor groove platform
geometric
IL_3IWN_005
IL_15052.4
IL_4V6M_0141/AA/242:247,
1/AA/277:284		Kink-turn with non-sequential stacking
homologous
IL_5J7L_014
IL_46174.3
IL_4V6M_0151/AA/249:252,
1/AA/274:275		No text annotation
homologous
IL_6CZR_405
NA
IL_4V6M_0161/AA/292:293,
1/AA/304:308		C-loop
homologous
IL_5J7L_016
IL_03109.3
IL_4V6M_0171/AA/367:369,
1/AA/392:393		Single bulged U
homologous
IL_4LFB_014
IL_89505.4
IL_4V6M_0181/AA/371:375,
1/AA/389:390		C-loop
geometric
IL_4LFB_015
IL_03109.3
IL_4V6M_0191/AA/375:376,
1/AA/387:389		Single bulged G
homologous
IL_5J7L_019
IL_00225.13
IL_4V6M_0201/AA/409:416,
1/AA/427:433		No text annotation
homologous
IL_4LFB_017
IL_28026.3
IL_4V6M_0211/AA/440:442,
1/AA/492:497		No text annotation
homologous
IL_5J7L_021
IL_33323.1
IL_4V6M_0221/AA/446:450,
1/AA/483:488		tSH-tHW-tWW
homologous
IL_5J7L_022
IL_88269.4
IL_4V6M_0231/AA/450:455,
1/AA/477:483		No text annotation
geometric
IL_4LFB_019
IL_31561.1
IL_4V6M_0241/AA/458:459,
1/AA/472:474		Single stack bend
geometric
IL_7KGA_003
IL_90729.1
IL_4V6M_0251/AA/460:462,
1/AA/470:471		Single bulged A
geometric
IL_4V9F_098
IL_31462.5
IL_4V6M_0261/AA/504:511,
1/AA/540:541		SSU/LSU pseudoknot
homologous
IL_5J7L_024
IL_41203.4
IL_4V6M_0271/AA/515:521,
1/AA/528:536		Kink-turn related
geometric
IL_4V88_415
NA
IL_4V6M_0281/AA/569:575,
1/AA/880:881		No text annotation
homologous
IL_4LFB_022
IL_38186.6
IL_4V6M_0291/AA/580:584,
1/AA/757:761		tSH-tHW-tHS
homologous
IL_5J7L_027
IL_17136.7
IL_4V6M_0301/AA/594:596,
1/AA/644:645		Major groove platform
homologous
IL_5J7L_028
IL_48076.6
IL_4V6M_0311/AA/597:598,
1/AA/640:643		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_029
IL_68140.4
IL_4V6M_0321/AA/605:612,
1/AA/628:633		No text annotation
homologous
IL_5J7L_030
IL_78349.3
IL_4V6M_0331/AA/654:655,
1/AA/751:754		Major groove platform; stack outside cWW
homologous
IL_5J7L_031
IL_50694.7
IL_4V6M_0341/AA/658:659,
1/AA/746:748		Single stack bend
homologous
IL_5J7L_032
IL_26793.1
IL_4V6M_0351/AA/662:666,
1/AA/740:743		Tandem non-canonical cWW pairs
homologous
IL_5J7L_033
IL_85033.2
IL_4V6M_1821/AA/673:677,
1/AA/713:717		Triple non-canonical cWW pairs
homologous
IL_4LFB_065
IL_49751.4
IL_4V6M_1831/AA/684:688,
1/AA/699:706		Kink-turn
homologous
IL_5J7L_035
IL_01488.3
IL_4V6M_0381/AA/774:778,
1/AA/804:805		Left turn
homologous
IL_4LFB_032
IL_29346.2
IL_4V6M_0391/AA/779:783,
1/AA/799:803		tSH-tHW-tHS
homologous
IL_5J7L_037
IL_17136.7
IL_4V6M_0401/AA/887:894,
1/AA/905:910		8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_4LFB_034
IL_41756.4
IL_4V6M_0411/AA/922:923,
1/AA/1393:1395		Single bulged A
homologous
IL_5J7L_039
IL_31462.5
IL_4V6M_0421/AA/925:927,
1/AA/1390:1391		Single bulged G
homologous
IL_5J7L_040
IL_00225.13
IL_4V6M_0431/AA/933:935,
1/AA/1380:1384		Minor groove platform
homologous
IL_4LFB_037
IL_47078.3
IL_4V6M_0441/AA/953:954,
1/AA/1226:1228		Minor groove platform
homologous
IL_4LFB_038
IL_51454.2
IL_4V6M_0451/AA/993:997,
1/AA/1044:1045		Minor groove platform
geometric
IL_5J7L_043
IL_47078.3
IL_4V6M_0461/AA/998:999,
1/AA/1041:1043		Single stack bend
homologous
IL_5J7L_044
IL_26793.1
IL_4V6M_0471/AA/1048:1050,
1/AA/1208:1209		Single bulged U
homologous
IL_5J7L_046
IL_89505.4
IL_4V6M_0481/AA/1052:1056,
1/AA/1204:1206		Isolated cWS basepair
homologous
IL_4LFB_044
IL_76319.5
IL_4V6M_0491/AA/1057:1058,
1/AA/1199:1203		Minor groove platform
homologous
IL_5J7L_048
IL_95583.2
IL_4V6M_0501/AA/1060:1061,
1/AA/1195:1197		Single bulged A
geometric
IL_5TBW_058
NA
IL_4V6M_0511/AA/1061:1063,
1/AA/1193:1195		Isolated non-canonical cWW pair
geometric
IL_5VCI_001
IL_28037.2
IL_4V6M_0521/AA/1124:1128,
1/AA/1144:1149		No text annotation
homologous
IL_5J7L_051
IL_06691.1
IL_4V6M_0531/AA/1129:1132,
1/AA/1142:1143		Minor groove platform
homologous
IL_5J7L_052
IL_15052.4
IL_4V6M_0541/AA/1158:1161,
1/AA/1175:1181		No text annotation
geometric
IL_5J7L_053
IL_42032.1
IL_4V6M_0551/AA/1247:1253,
1/AA/1284:1290		No text annotation
homologous
IL_5J7L_054
IL_09129.2
IL_4V6M_0561/AA/1255:1258,
1/AA/1277:1282		180 degree turn
homologous
IL_4LFB_052
IL_11344.2
IL_4V6M_0571/AA/1259:1263,
1/AA/1272:1276		Triple sheared
homologous
IL_5J7L_056
IL_17948.2
IL_4V6M_0581/AA/1303:1308,
1/AA/1329:1334		No text annotation
geometric
IL_4V88_462
NA
IL_4V6M_0591/AA/1399:1401,
1/AA/1501:1504		No text annotation
geometric
IL_5J7L_058
IL_61438.4
IL_4V6M_0601/AA/1401:1404,
1/AA/1497:1501		No text annotation
geometric
IL_4V88_464
NA
IL_4V6M_0611/AA/1405:1407,
1/AA/1494:1496		Isolated non-canonical cWW pair
geometric
IL_5MWI_004
IL_87907.2
IL_4V6M_0621/AA/1407:1409,
1/AA/1491:1494		Decoding loop related
geometric
IL_5Z1I_002
NA
IL_4V6M_0631/AA/1412:1414,
1/AA/1486:1488		Isolated non-canonical cWW pair
homologous
IL_5J7L_061
IL_87907.2
IL_4V6M_0641/AA/1416:1419,
1/AA/1481:1484		Double sheared
homologous
IL_6CZR_169
NA
IL_4V6M_0651/AA/1430:1435,
1/AA/1466:1470		Triple sheared related
homologous
IL_5J7L_063
IL_80231.1
IL_4V6M_0661/AA/1440:1442,
1/AA/1460:1461		Single bulged A
homologous
IL_5J7L_064
IL_31462.5
IL_4V6M_0671/AA/1445:1448,
1/AA/1455:1457		No text annotation
homologous
IL_5J7L_065
IL_31531.3
IL_4V6M_0681/AV/30:32,
1/AV/40:42		Self complementary
homologous
IL_5E81_371
NA
IL_4V6M_0691/B7/17:18,
1/B7/65:67		Major groove intercalation
homologous
IL_5J7L_355
IL_31462.5
IL_4V6M_0701/B7/23:28,
1/B7/56:60		No text annotation
homologous
IL_7A0S_103
IL_18472.4
IL_4V6M_0711/B7/30:31,
1/B7/51:54		No text annotation
homologous
IL_8P9A_366
IL_15052.4
IL_4V6M_0721/B7/34:38,
1/B7/44:48		Symmetric double minor groove platform
homologous
IL_5J7L_358
IL_58103.11
IL_4V6M_0731/B7/71:79,
1/B7/97:105		Bacterial 5S Loop E
homologous
IL_7RQB_115
NA
IL_4V6M_0741/B8/24:30,
1/B8/510:516		Triple sheared with non-canonical cWW
homologous
IL_5J7L_245
IL_04021.2
IL_4V6M_0751/B8/36:37,
1/B8/442:444		Single bulged A
homologous
IL_7RQB_002
NA
IL_4V6M_0761/B8/43:44,
1/B8/434:436		Minor groove platform
homologous
IL_5J7L_247
IL_51454.2
IL_4V6M_1841/B8/82:85,
1/B8/97:104		Kink-turn
geometric
IL_1U63_003
IL_24134.1
IL_4V6M_0781/B8/183:184,
1/B8/212:214		Single stack bend
homologous
IL_5J7L_249
IL_90729.1
IL_4V6M_0791/B8/188:194,
1/B8/201:208		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_006
NA
IL_4V6M_0801/B8/239:245,
1/B8/253:258		7x6 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_251
IL_26307.2
IL_4V6M_0811/B8/269:271,
1/B8/366:370		No text annotation
homologous
IL_5J7L_252
IL_47972.1
IL_4V6M_0821/B8/274:281,
1/B8/359:363		No text annotation
homologous
IL_5J7L_253
IL_77870.1
IL_4V6M_0831/B8/293:295,
1/B8/343:347		No text annotation
homologous
IL_4WF9_014
IL_69440.3
IL_4V6M_0841/B8/481:484,
1/B8/496:509		No text annotation
homologous
IL_5J7L_255
IL_81516.2
IL_4V6M_0851/B8/536:539,
1/B8/554:557		Double sheared
homologous
IL_5J7L_256
IL_09705.15
IL_4V6M_0861/B8/564:566,
1/B8/575:577		Isolated non-canonical cWW pair
homologous
IL_5J7L_257
IL_07785.1
IL_4V6M_0871/B8/606:610,
1/B8/618:622		AAA cross-strand stack
homologous
IL_5J7L_258
IL_66798.2
IL_4V6M_0881/B8/672:674,
1/B8/806:808		Isolated non-canonical cWW pair
homologous
IL_5J7L_259
IL_87907.2
IL_4V6M_0891/B8/674:678,
1/B8/799:806		tHW-tHW cross-strand stack
geometric
IL_7RQB_018
NA
IL_4V6M_0901/B8/697:698,
1/B8/763:765		Single bulged A
homologous
IL_5J7L_261
IL_31462.5
IL_4V6M_0911/B8/702:703,
1/B8/728:730		Single bulged G
homologous
IL_7RQB_020
NA
IL_4V6M_0921/B8/703:707,
1/B8/724:728		Triple sheared
geometric
IL_7RQB_021
NA
IL_4V6M_0931/B8/738:740,
1/B8/757:758		Major groove platform
homologous
IL_5J7L_264
IL_48076.6
IL_4V6M_0941/B8/775:777,
1/B8/787:791		Multiple bulged bases
geometric
IL_5TBW_033
NA
IL_4V6M_0951/B8/837:838,
1/B8/940:942		Single stack bend
homologous
IL_5J7L_266
IL_90729.1
IL_4V6M_0961/B8/844:848,
1/B8/930:934		No text annotation
homologous
IL_5J7L_399
IL_96236.1
IL_4V6M_0971/B8/850:851,
1/B8/926:928		Single stack bend
homologous
IL_5J7L_269
IL_26793.1
IL_4V6M_0981/B8/856:858,
1/B8/919:921		Isolated non-canonical cWW pair
geometric
IL_5TBW_068
NA
IL_4V6M_1851/B8/856:862,
1/B8/915:921		7x7 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_5J7L_270
IL_29198.2
IL_4V6M_0991/B8/858:862,
1/B8/915:919		5x5 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_7RQB_027
NA
IL_4V6M_1001/B8/862:863,
1/B8/913:915		Single bulged G
geometric
IL_5J7L_271
IL_00225.13
IL_4V6M_1011/B8/864:868,
1/B8/909:912		C-loop
homologous
IL_5J7L_272
IL_26222.2
IL_4V6M_1021/B8/870:872,
1/B8/905:907		Isolated non-canonical cWW pair
homologous
IL_5J7L_273
IL_28037.2
IL_4V6M_1031/B8/875:879,
1/B8/898:902		No text annotation
IL_4V6M_1041/B8/880:883,
1/B8/893:897		Tandem non-canonical cWW pairs
geometric
IL_6JDV_002
IL_85033.2
IL_4V6M_1051/B8/994:996,
1/B8/1159:1160		Single bulged C
homologous
IL_4WF9_035
IL_61258.15
IL_4V6M_1061/B8/998:1002,
1/B8/1153:1157		UAA/GAN
homologous
IL_5J7L_277
IL_38507.2
IL_4V6M_1071/B8/1004:1011,
1/B8/1150:1151		SSU/LSU pseudoknot
homologous
IL_5J7L_278
IL_41203.4
IL_4V6M_1081/B8/1011:1013,
1/B8/1149:1150		Single bulged U
geometric
IL_5J7L_279
IL_89505.4
IL_4V6M_1091/B8/1018:1024,
1/B8/1140:1144		Kink-turn related
homologous
IL_4WF9_039
IL_57188.5
IL_4V6M_1101/B8/1024:1030,
1/B8/1124:1140		No text annotation
geometric
IL_5J7L_281
IL_50715.3
IL_4V6M_1111/B8/1031:1034,
1/B8/1121:1123		Isolated non-canonical cWW pair
homologous
IL_5J7L_282
IL_57744.1
IL_4V6M_1121/B8/1038:1041,
1/B8/1114:1117		Tandem non-canonical cWW pairs
homologous
IL_5J7L_283
IL_85033.2
IL_4V6M_1131/B8/1043:1051,
1/B8/1108:1112		Kink-turn
geometric
IL_5J7L_284
IL_99692.2
IL_4V6M_1141/B8/1059:1062,
1/B8/1076:1079		No text annotation
homologous
IL_6PRV_001
IL_92446.2
IL_4V6M_1151/B8/1087:1090,
1/B8/1101:1102		Major groove platform
geometric
IL_4WF9_026
IL_48076.6
IL_4V6M_1161/B8/1196:1198,
1/B8/1247:1250		Isolated cWS basepair
homologous
IL_5J7L_286
IL_42997.3
IL_4V6M_1171/B8/1202:1206,
1/B8/1240:1243		No text annotation
homologous
IL_5J7L_287
IL_91920.1
IL_4V6M_1181/B8/1208:1215,
1/B8/1234:1238		Kink-turn
homologous
IL_5J7L_288
IL_70923.9
IL_4V6M_1191/B8/1262:1269,
1/B8/2011:2017		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_289
IL_04346.10
IL_4V6M_1201/B8/1310:1313,
1/B8/1603:1604		Major groove platform; stack outside cWW
homologous
IL_7RQB_050
NA
IL_4V6M_1211/B8/1319:1323,
1/B8/1331:1333		C-loop
homologous
IL_5J7L_291
IL_63596.11
IL_4V6M_1221/B8/1351:1355,
1/B8/1376:1380		UAA/GAN
homologous
IL_5J7L_292
IL_89021.2
IL_4V6M_1231/B8/1357:1361,
1/B8/1370:1374		tSH-tHW-tHS
homologous
IL_5J7L_293
IL_17136.7
IL_4V6M_1241/B8/1415:1416,
1/B8/1582:1587		No text annotation
homologous
IL_5J7L_294
IL_87211.1
IL_4V6M_1251/B8/1417:1421,
1/B8/1577:1581		UAA/GAN
homologous
IL_5J7L_295
IL_38507.2
IL_4V6M_1261/B8/1432:1435,
1/B8/1557:1561		Tandem non-canonical cWW pairs
homologous
IL_5J7L_296
IL_58112.2
IL_4V6M_1271/B8/1437:1440,
1/B8/1551:1555		tSH-tHW
homologous
IL_7A0S_053
IL_99646.2
IL_4V6M_1281/B8/1468:1471,
1/B8/1520:1524		No text annotation
homologous
IL_5J7L_299
IL_68574.4
IL_4V6M_1291/B8/1474:1478,
1/B8/1513:1517		tSH-tHW-tHS
homologous
IL_5J7L_300
IL_38862.4
IL_4V6M_1301/B8/1481:1482,
1/B8/1507:1510		No text annotation
IL_4V6M_1311/B8/1489:1491,
1/B8/1499:1500		Single bulged A
homologous
IL_7RQB_062
NA
IL_4V6M_1321/B8/1526:1529,
1/B8/1542:1546		UAA/GAN variation
homologous
IL_5J7L_303
IL_23774.1
IL_4V6M_1331/B8/1651:1656,
1/B8/2004:2006		No text annotation
homologous
IL_5J7L_304
IL_12566.4
IL_4V6M_1341/B8/1663:1665,
1/B8/1995:1997		Isolated tWW turn
homologous
IL_4WF9_063
IL_67095.2
IL_4V6M_1351/B8/1666:1669,
1/B8/1993:1994		Major groove platform; stack outside cWW
geometric
IL_7RQB_066
NA
IL_4V6M_1871/B8/1666:1674,
1/B8/1990:1994		No text annotation
homologous
IL_5J7L_386
IL_22854.4
IL_4V6M_1361/B8/1669:1674,
1/B8/1990:1993		Intercalated tWH
homologous
IL_5J7L_307
IL_76758.2
IL_4V6M_1371/B8/1686:1691,
1/B8/1696:1702		tSH-tSH-tHH-tHS
geometric
IL_7RQB_068
NA
IL_4V6M_1381/B8/1712:1718,
1/B8/1742:1746		6x5 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_309
IL_88269.4
IL_4V6M_1391/B8/1720:1724,
1/B8/1736:1740		Triple sheared
homologous
IL_5J7L_310
IL_50730.2
IL_4V6M_1401/B8/1727:1728,
1/B8/1731:1733		Single bulged C
geometric
IL_3W3S_001
IL_61258.15
IL_4V6M_1411/B8/1770:1771,
1/B8/1980:1982		Single bulged A
homologous
IL_5J7L_312
IL_31462.5
IL_4V6M_1421/B8/1798:1804,
1/B8/1813:1821		Kink-turn related
homologous
IL_5J7L_313
IL_17069.5
IL_4V6M_1431/B8/1837:1840,
1/B8/1902:1903		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
IL_95583.2
IL_4V6M_1441/B8/1841:1842,
1/B8/1898:1901		Major groove intercalation
homologous
IL_5J7L_315
IL_82107.4
IL_4V6M_1451/B8/1846:1849,
1/B8/1893:1894		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_316
IL_68140.4
IL_4V6M_1881/B8/1851:1860,
1/B8/1882:1891		No text annotation
homologous
IL_5J7L_387
IL_61249.1
IL_4V6M_1461/B8/1864:1867,
1/B8/1874:1878		UAA/GAN
homologous
IL_4WF9_075
IL_77691.5
IL_4V6M_1471/B8/1933:1934,
1/B8/1964:1967		Multiple bulged bases
geometric
IL_7V9E_001
NA
IL_4V6M_1481/B8/1934:1945,
1/B8/1961:1964		No text annotation
homologous
IL_7A0S_072
IL_04332.3
IL_4V6M_1491/B8/2050:2052,
1/B8/2617:2618		Major groove platform
homologous
IL_5J7L_320
IL_48076.6
IL_4V6M_1501/B8/2054:2056,
1/B8/2612:2615		No text annotation
homologous
IL_5J7L_321
IL_83389.2
IL_4V6M_1511/B8/2067:2069,
1/B8/2442:2443		Single bulged U
homologous
IL_7RQB_080
NA
IL_4V6M_1521/B8/2070:2071,
1/B8/2438:2441		Minor groove platform
homologous
IL_7RQB_081
NA
IL_4V6M_1531/B8/2081:2083,
1/B8/2236:2239		Isolated tHS basepair with bulges
homologous
IL_5J7L_325
IL_85599.2
IL_4V6M_1541/B8/2085:2087,
1/B8/2232:2234		Isolated non-canonical cWW pair
homologous
IL_5J7L_326
IL_28037.2
IL_4V6M_1551/B8/2103:2105,
1/B8/2184:2186		No text annotation
geometric
IL_1NBS_006
NA
IL_4V6M_1561/B8/2108:2110,
1/B8/2179:2181		Isolated non-canonical cWW pair
homologous
IL_3U4M_001
IL_28037.2
IL_4V6M_1571/B8/2110:2122,
1/B8/2176:2179		No text annotation
IL_4V6M_1901/B8/2124:2136,
1/B8/2155:2174		No text annotation
IL_4V6M_1581/B8/2202:2204,
1/B8/2220:2221		Single bulged U
homologous
IL_5J7L_331
IL_89505.4
IL_4V6M_1591/B8/2297:2299,
1/B8/2317:2321		No text annotation
homologous
IL_5J7L_332
IL_61476.2
IL_4V6M_1601/B8/2350:2353,
1/B8/2364:2367		Double sheared
homologous
IL_5J7L_333
IL_09705.15
IL_4V6M_1611/B8/2401:2403,
1/B8/2414:2415		Major groove intercalation
geometric
IL_1ET4_002
IL_89505.4
IL_4V6M_1621/B8/2453:2454,
1/B8/2498:2500		Single stack bend
geometric
IL_4WF9_089
IL_26793.1
IL_4V6M_1631/B8/2454:2455,
1/B8/2496:2498		Major groove platform
homologous
IL_4WF9_090
IL_48076.6
IL_4V6M_1641/B8/2457:2459,
1/B8/2493:2494		Major groove platform
geometric
IL_5TBW_104
NA
IL_4V6M_1651/B8/2459:2461,
1/B8/2489:2493		Major groove minor groove platform with extra cWW
homologous
IL_5J7L_337
IL_51387.2
IL_4V6M_1661/B8/2466:2470,
1/B8/2480:2484		Triple sheared
homologous
IL_5J7L_338
IL_17948.2
IL_4V6M_1671/B8/2507:2508,
1/B8/2580:2582		Major groove platform
homologous
IL_7A0S_088
IL_07039.3
IL_4V6M_1681/B8/2510:2512,
1/B8/2574:2578		Isolated non-canonical cWW with bulges
geometric
IL_5J7L_340
IL_07785.1
IL_4V6M_1691/B8/2512:2513,
1/B8/2571:2574		No text annotation
homologous
IL_5J7L_341
IL_42626.2
IL_4V6M_1701/B8/2522:2523,
1/B8/2540:2543		Major groove platform with intercalation
homologous
IL_7RQB_099
NA
IL_4V6M_1711/B8/2591:2592,
1/B8/2601:2603		Single bulged A
homologous
IL_5J7L_344
IL_31462.5
IL_4V6M_1721/B8/2636:2640,
1/B8/2774:2782		tSH-tHS-tHW
homologous
IL_5J7L_345
IL_04638.3
IL_4V6M_1731/B8/2652:2658,
1/B8/2663:2668		Sarcin-Ricin target in LSU H95; G-bulge
homologous
IL_7RQB_103
NA
IL_4V6M_1741/B8/2680:2684,
1/B8/2725:2727		C-loop
homologous
IL_5J7L_347
IL_63596.11
IL_4V6M_1751/B8/2687:2691,
1/B8/2718:2722		No text annotation
homologous
IL_5J7L_348
IL_23774.1
IL_4V6M_1761/B8/2695:2696,
1/B8/2711:2714		Multiple bulged bases
homologous
IL_5J7L_349
IL_42626.2
IL_4V6M_1771/B8/2737:2742,
1/B8/2762:2767		UAA/GAN with extra cWW
homologous
IL_5J7L_350
IL_49767.8
IL_4V6M_1781/B8/2806:2811,
1/B8/2889:2892		No text annotation
homologous
IL_5J7L_351
IL_29471.1
IL_4V6M_1791/B8/2838:2839,
1/B8/2878:2880		Major groove intercalation
homologous
IL_5J7L_352
IL_66635.5
IL_4V6M_1801/B8/2843:2846,
1/B8/2870:2874		Multiple bulged bases with non-canonical cWW
homologous
IL_5J7L_353
IL_64231.5
IL_4V6M_1811/B8/2847:2852,
1/B8/2865:2869		tHS double platform
homologous
IL_5J7L_354
IL_70411.2

Problematic loops

#loop idProblemSequence
IL_4V6M_036No text annotation
IL_4V6M_037Kink-turn
IL_4V6M_077No text annotation
IL_4V6M_186No text annotation
IL_4V6M_189No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_4V6M_0011/AA/46:47,
1/AA/361:367,
1/AA/393:395		No text annotation
homologous
J3_5J7L_001
J3_67856.4
J3_4V6M_0281/AA/46:52,
1/AA/359:367,
1/AA/393:395		No text annotation
homologous
J3_4LFB_014
J3_46317.4
J3_4V6M_0021/AA/586:588,
1/AA/651:654,
1/AA/754:755		No text annotation
homologous
J3_5J7L_002
J3_56052.5
J3_4V6M_0291/AA/586:588,
1/AA/651:655,
1/AA/751:755		No text annotation
homologous
J3_5J7L_051
J3_17385.4
J3_4V6M_0031/AA/672:673,
1/AA/717:725,
1/AA/732:734		No text annotation
homologous
J3_5J7L_003
J3_11934.4
J3_4V6M_0041/AA/826:829,
1/AA/857:861,
1/AA/868:874		No text annotation
homologous
J3_5J7L_004
J3_85054.4
J3_4V6M_0051/AA/936:939,
1/AA/1344:1350,
1/AA/1372:1379		No text annotation
homologous
J3_4LFB_002
J3_25303.4
J3_4V6M_0061/AA/943:946,
1/AA/1235:1237,
1/AA/1337:1340		No text annotation
homologous
J3_5J7L_005
J3_52655.4
J3_4V6M_0071/AA/955:962,
1/AA/973:984,
1/AA/1221:1225		No text annotation
homologous
J3_5J7L_006
J3_83516.4
J3_4V6M_0081/AA/990:993,
1/AA/1045:1047,
1/AA/1210:1215		No text annotation
homologous
J3_4LFB_005
J3_82572.1
J3_4V6M_0301/AA/990:997,
1/AA/1044:1047,
1/AA/1210:1215		No text annotation
homologous
J3_5J7L_053
J3_76475.2
J3_4V6M_0091/AA/1003:1006,
1/AA/1023:1027,
1/AA/1034:1037		No text annotation
J3_4V6M_0101/AA/1063:1068,
1/AA/1107:1113,
1/AA/1187:1193		No text annotation
homologous
J3_5J7L_008
J3_08394.3
J3_4V6M_0371/AA/1073:1074,
1/AA/1083:1086,
1/AA/1099:1102		No text annotation
homologous
J3_4LFB_017
J3_79369.1
J3_4V6M_0121/AA/1116:1118,
1/AA/1155:1158,
1/AA/1181:1184		No text annotation
homologous
J3_5J7L_010
J3_82365.4
J3_4V6M_0311/AA/1116:1118,
1/AA/1155:1161,
1/AA/1175:1184		No text annotation
homologous
J3_5J7L_054
J3_17791.2
J3_4V6M_0131/AA/1237:1241,
1/AA/1296:1303,
1/AA/1334:1337		No text annotation
homologous
J3_4LFB_009
J3_37047.6
J3_4V6M_0141/B7/10:16,
1/B7/68:70,
1/B7/106:110		No text annotation
homologous
J3_5J7L_049
J3_89095.1
J3_4V6M_0151/B8/30:31,
1/B8/474:481,
1/B8/509:510		No text annotation
homologous
J3_7RQB_001
NA
J3_4V6M_0321/B8/30:31,
1/B8/474:484,
1/B8/496:510		No text annotation
homologous
J3_9DFE_002
J3_92134.2
J3_4V6M_0331/B8/32:35,
1/B8/445:461,
1/B8/468:473		No text annotation
homologous
J3_9DFE_003
J3_30040.2
J3_4V6M_0161/B8/56:57,
1/B8/70:76,
1/B8/110:114		No text annotation
homologous
J3_5J7L_037
J3_35667.2
J3_4V6M_0171/B8/683:689,
1/B8/773:775,
1/B8/791:794		No text annotation
homologous
J3_5J7L_038
J3_64189.2
J3_4V6M_0181/B8/698:700,
1/B8/732:736,
1/B8/760:763		No text annotation
homologous
J3_5J7L_039
J3_44724.7
J3_4V6M_0191/B8/1055:1057,
1/B8/1081:1087,
1/B8/1102:1104		No text annotation
homologous
J3_6PRV_001
J3_28621.5
J3_4V6M_0201/B8/1298:1303,
1/B8/1625:1627,
1/B8/1639:1642		No text annotation
homologous
J3_5J7L_041
J3_32852.6
J3_4V6M_0211/B8/1306:1309,
1/B8/1605:1611,
1/B8/1620:1622		No text annotation
homologous
J3_7A0S_007
J3_71677.1
J3_4V6M_0221/B8/1344:1350,
1/B8/1381:1385,
1/B8/1402:1403		No text annotation
J3_4V6M_0341/B8/1424:1429,
1/B8/1564:1565,
1/B8/1568:1574		No text annotation
homologous
J3_5J7L_069
J3_34864.2
J3_4V6M_0231/B8/2091:2093,
1/B8/2196:2200,
1/B8/2223:2228		Kink-turn in J3
homologous
J3_5J7L_044
J3_89368.5
J3_4V6M_0351/B8/2282:2284,
1/B8/2384:2395,
1/B8/2421:2427		No text annotation
homologous
J3_5J7L_070
J3_20992.1
J3_4V6M_0241/B8/2295:2297,
1/B8/2321:2323,
1/B8/2332:2337		No text annotation
homologous
J3_5J7L_045
J3_61124.2
J3_4V6M_0361/B8/2295:2299,
1/B8/2317:2323,
1/B8/2332:2337		No text annotation
homologous
J3_5J7L_071
J3_44961.1
J3_4V6M_0251/B8/2517:2520,
1/B8/2545:2547,
1/B8/2561:2567		No text annotation
homologous
J3_5J7L_046
J3_32601.5
J3_4V6M_0261/B8/2789:2791,
1/B8/2805:2806,
1/B8/2892:2894		No text annotation
homologous
J3_5J7L_047
J3_30104.1
J3_4V6M_0271/B8/2812:2815,
1/B8/2831:2836,
1/B8/2882:2888		No text annotation
homologous
J3_5J7L_048
J3_64069.1
J4_4V6M_0011/AA/115:122,
1/AA/239:240,
1/AA/286:289,
1/AA/311:312		No text annotation
homologous
J4_4LFB_001
J4_35578.3
J4_4V6M_0021/AA/142:144,
1/AA/178:184,
1/AA/193:198,
1/AA/219:221		No text annotation
homologous
J4_5J7L_002
J4_01665.1
J4_4V6M_0031/AA/575:577,
1/AA/764:769,
1/AA/810:821,
1/AA/879:880		No text annotation
homologous
J4_4LFB_003
J4_61885.6
J4_4V6M_0041/AV/7:10,
1/AV/26:28,
1/AV/44:50,
1/AV/66:67		No text annotation
homologous
J4_8VU0_001
J4_70449.27
J4_4V6M_0051/B8/268:269,
1/B8/370:375,
1/B8/399:406,
1/B8/421:424		No text annotation
homologous
J4_5J7L_018
J4_45801.6
J4_4V6M_0061/B8/297:301,
1/B8/316:319,
1/B8/323:325,
1/B8/337:341		No text annotation
homologous
J4_5J7L_019
J4_71729.5
J4_4V6M_0071/B8/601:604,
1/B8/624:628,
1/B8/635:638,
1/B8/650:656		No text annotation
homologous
J4_5J7L_020
J4_60168.1
J4_4V6M_0081/B8/1270:1276,
1/B8/1294:1295,
1/B8/1645:1648,
1/B8/2009:2010		No text annotation
homologous
J4_5J7L_021
J4_64571.5
J4_4V6M_0091/B8/1310:1314,
1/B8/1338:1343,
1/B8/1404:1405,
1/B8/1597:1604		No text annotation
homologous
J4_9DFE_004
J4_69051.6
J4_4V6M_0101/B8/1313:1314,
1/B8/1338:1343,
1/B8/1404:1405,
1/B8/1597:1603		No text annotation
homologous
J4_9DFE_005
J4_10313.5
J4_4V6M_0111/B8/1444:1445,
1/B8/1466:1467,
1/B8/1525:1526,
1/B8/1546:1547		No text annotation
homologous
J4_5J7L_024
J4_24280.2
J4_4V6M_0121/B8/1772:1776,
1/B8/1788:1792,
1/B8/1827:1830,
1/B8/1975:1979		No text annotation
homologous
J4_9DFE_007
J4_61477.5
J4_4V6M_0131/B8/1833:1835,
1/B8/1905:1906,
1/B8/1924:1933,
1/B8/1967:1972		No text annotation
homologous
J4_5J7L_026
J4_93343.1
J4_4V6M_0141/B8/2285:2289,
1/B8/2343:2347,
1/B8/2370:2372,
1/B8/2381:2383		No text annotation
homologous
J4_5J7L_027
J4_04930.6
J4_4V6M_0151/B8/2643:2646,
1/B8/2674:2676,
1/B8/2731:2735,
1/B8/2769:2771		No text annotation
homologous
J4_5J7L_028
J4_77044.4
J5_4V6M_0011/AA/36:39,
1/AA/403:406,
1/AA/436:440,
1/AA/497:500,
1/AA/545:548		No text annotation
homologous
J5_5J7L_001
J5_92941.1
J5_4V6M_0021/AA/36:39,
1/AA/403:406,
1/AA/436:442,
1/AA/492:500,
1/AA/545:548		No text annotation
homologous
J5_5J7L_002
J5_67416.1
J5_4V6M_0031/AA/58:61,
1/AA/106:113,
1/AA/314:316,
1/AA/337:339,
1/AA/350:354		No text annotation
homologous
J5_5J7L_003
J5_59910.6
J5_4V6M_0041/B8/47:54,
1/B8/116:121,
1/B8/130:131,
1/B8/148:150,
1/B8/176:178		No text annotation
homologous
J5_5J7L_013
J5_01737.2
J5_4V6M_0051/B8/531:533,
1/B8/560:564,
1/B8/577:579,
1/B8/1261:1262,
1/B8/2017:2018		No text annotation
homologous
J5_5J7L_014
J5_43153.5
J5_4V6M_0061/B8/584:589,
1/B8/668:671,
1/B8/809:812,
1/B8/1195:1196,
1/B8/1250:1256		No text annotation
homologous
J5_5J7L_015
J5_74302.5
J5_4V6M_0071/B8/1674:1682,
1/B8/1706:1707,
1/B8/1751:1752,
1/B8/1756:1764,
1/B8/1988:1990		No text annotation
homologous
J5_5J7L_016
J5_62523.6
J5_4V6M_0081/B8/2057:2064,
1/B8/2446:2453,
1/B8/2500:2506,
1/B8/2583:2588,
1/B8/2606:2611		No text annotation
J5_4V6M_0091/B8/2074:2077,
1/B8/2243:2246,
1/B8/2258:2259,
1/B8/2281:2282,
1/B8/2427:2435		No text annotation
homologous
J5_9DFE_007
J5_39529.1
J6_4V6M_0011/B8/45:46,
1/B8/179:183,
1/B8/214:224,
1/B8/231:235,
1/B8/262:266,
1/B8/426:433		No text annotation
J6_4V6M_0021/B8/2074:2077,
1/B8/2243:2246,
1/B8/2258:2259,
1/B8/2281:2284,
1/B8/2384:2395,
1/B8/2421:2435		No text annotation
J7_4V6M_0011/B8/8:15,
1/B8/525:531,
1/B8/2018:2023,
1/B8/2040:2043,
1/B8/2625:2630,
1/B8/2788:2789,
1/B8/2894:2895		No text annotation
J7_4V6M_0021/B8/817:822,
1/B8/835:838,
1/B8/940:946,
1/B8/971:976,
1/B8/987:991,
1/B8/1163:1164,
1/B8/1185:1190		No text annotation

Problematic loops

#loop idProblemSequence
J3_4V6M_011No text annotation

Coloring options:
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