IL_4V6M_133
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- GAGAAC*GAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_133 not in the Motif Atlas
- Homologous match to IL_5J7L_304
- Geometric discrepancy: 0.207
- The information below is about IL_5J7L_304
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4V6M|1|B8|G|1651
4V6M|1|B8|A|1652
4V6M|1|B8|G|1653
4V6M|1|B8|A|1654
4V6M|1|B8|A|1655
4V6M|1|B8|C|1656
*
4V6M|1|B8|G|2004
4V6M|1|B8|A|2005
4V6M|1|B8|C|2006
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BD
- 50S ribosomal protein L3
- Chain BN
- 50S ribosomal protein L17
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