IL_4V6M_137
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 4V6M|1|B8|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_137 not in the Motif Atlas
- Geometric match to IL_7RQB_068
- Geometric discrepancy: 0.1244
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V6M|1|B8|C|1686
4V6M|1|B8|G|1687
4V6M|1|B8|U|1688
4V6M|1|B8|A|1689
4V6M|1|B8|A|1690
4V6M|1|B8|C|1691
*
4V6M|1|B8|G|1696
4V6M|1|B8|G|1697
4V6M|1|B8|A|1698
4V6M|1|B8|G|1699
4V6M|1|B8|A|1700
4V6M|1|B8|A|1701
4V6M|1|B8|G|1702
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain B6
- 50S ribosomal protein L2
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