IL_4V6M_140
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 4V6M|1|B8|C|1732
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_140 not in the Motif Atlas
- Geometric match to IL_3W3S_001
- Geometric discrepancy: 0.3483
- The information below is about IL_3W3S_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
4V6M|1|B8|C|1727
4V6M|1|B8|C|1728
*
4V6M|1|B8|G|1731
4V6M|1|B8|C|1732
4V6M|1|B8|G|1733
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: