IL_4V6M_151
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 4V6M|1|B8|U|2068
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_151 not in the Motif Atlas
- Homologous match to IL_7RQB_080
- Geometric discrepancy: 0.1101
- The information below is about IL_7RQB_080
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.16
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 116
Unit IDs
4V6M|1|B8|G|2067
4V6M|1|B8|U|2068
4V6M|1|B8|G|2069
*
4V6M|1|B8|C|2442
4V6M|1|B8|C|2443
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AZ
- Cell division protein FtsQ
- Chain BE
- 50S ribosomal protein L4
- Chain BL
- 50S ribosomal protein L15
Coloring options: