IL_4V6M_157

3D structure

PDB id

4V6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-SecYE complex in the membrane environment

Experimental method

ELECTRON MICROSCOPY

Resolution

7.1 Å

Loop

Sequence

GUGUAGGAUAGGU*ACCC

Length

17 nucleotides

Bulged bases

4V6M|1|B8|U|2111, 4V6M|1|B8|G|2116, 4V6M|1|B8|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6M|1|B8|G|2110
4V6M|1|B8|U|2111
4V6M|1|B8|G|2112
4V6M|1|B8|U|2113
4V6M|1|B8|A|2114
4V6M|1|B8|G|2115
4V6M|1|B8|G|2116
4V6M|1|B8|A|2117
4V6M|1|B8|U|2118
4V6M|1|B8|A|2119
4V6M|1|B8|G|2120
4V6M|1|B8|G|2121
4V6M|1|B8|U|2122
*
4V6M|1|B8|A|2176
4V6M|1|B8|C|2177
4V6M|1|B8|C|2178
4V6M|1|B8|C|2179

Current chains

Chain B8

23S RIBOSOMAL RNA

Nearby chains

Chain B5

50S ribosomal protein L1