IL_4V6M_176
3D structure
- PDB id
- 4V6M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-SecYE complex in the membrane environment
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.1 Å
Loop
- Sequence
- UU*ACUG
- Length
- 6 nucleotides
- Bulged bases
- 4V6M|1|B8|C|2712, 4V6M|1|B8|U|2713
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6M_176 not in the Motif Atlas
- Homologous match to IL_5J7L_349
- Geometric discrepancy: 0.088
- The information below is about IL_5J7L_349
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
4V6M|1|B8|U|2695
4V6M|1|B8|U|2696
*
4V6M|1|B8|A|2711
4V6M|1|B8|C|2712
4V6M|1|B8|U|2713
4V6M|1|B8|G|2714
Current chains
- Chain B8
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BN
- 50S ribosomal protein L17
- Chain BP
- 50S ribosomal protein L19
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