IL_4V6M_186

3D structure

PDB id

4V6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-SecYE complex in the membrane environment

Experimental method

ELECTRON MICROSCOPY

Resolution

7.1 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

4V6M|1|B8|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6M|1|B8|C|1043
4V6M|1|B8|C|1044
4V6M|1|B8|C|1045
4V6M|1|B8|A|1046
4V6M|1|B8|G|1047
4V6M|1|B8|A|1048
4V6M|1|B8|C|1049
4V6M|1|B8|A|1050
4V6M|1|B8|G|1051
4V6M|1|B8|C|1052
*
4V6M|1|B8|G|1107
4V6M|1|B8|U|1108
4V6M|1|B8|C|1109
4V6M|1|B8|G|1110
4V6M|1|B8|A|1111
4V6M|1|B8|G|1112

Current chains

Chain B8

23S RIBOSOMAL RNA

Nearby chains

Chain BG

50S ribosomal protein L6