IL_4V6N_092
3D structure
- PDB id
- 4V6N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- C(PSU)GA*UGG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6N_092 not in the Motif Atlas
- Homologous match to IL_5J7L_336
- Geometric discrepancy: 0.5352
- The information below is about IL_5J7L_336
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6N|1|AB|C|2456
4V6N|1|AB|PSU|2457
4V6N|1|AB|G|2458
4V6N|1|AB|A|2459
*
4V6N|1|AB|U|2493
4V6N|1|AB|G|2494
4V6N|1|AB|G|2495
Current chains
- Chain AB
- 23S ribosomal RNA
Nearby chains
- Chain AO
- 50S ribosomal protein L16
- Chain AY
- 50S ribosomal protein L27
- Chain BB
- Transfer RNA; tRNA
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