IL_4V6N_143

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

GUGAAAUCC*GAACUGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|BA|G|604
4V6N|1|BA|U|605
4V6N|1|BA|G|606
4V6N|1|BA|A|607
4V6N|1|BA|A|608
4V6N|1|BA|A|609
4V6N|1|BA|U|610
4V6N|1|BA|C|611
4V6N|1|BA|C|612
*
4V6N|1|BA|G|628
4V6N|1|BA|A|629
4V6N|1|BA|A|630
4V6N|1|BA|C|631
4V6N|1|BA|U|632
4V6N|1|BA|G|633
4V6N|1|BA|C|634

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BG

30S ribosomal protein S4

Chain BS

30S ribosomal protein S16

Chain BT

30S ribosomal protein S17