IL_4V6N_146

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

GUAGAG*UGGAC

Length

11 nucleotides

Bulged bases

4V6N|1|BA|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|BA|G|661
4V6N|1|BA|U|662
4V6N|1|BA|A|663
4V6N|1|BA|G|664
4V6N|1|BA|A|665
4V6N|1|BA|G|666
*
4V6N|1|BA|U|740
4V6N|1|BA|G|741
4V6N|1|BA|G|742
4V6N|1|BA|A|743
4V6N|1|BA|C|744

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BI

30S ribosomal protein S6

Chain BR

30S ribosomal protein S15

Chain BU

30S ribosomal protein S18

Chain BX

30S ribosomal protein S21