IL_4V6N_195

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

4V6N|1|AB|C|2165

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|AB|G|2124
4V6N|1|AB|G|2125
4V6N|1|AB|A|2126
4V6N|1|AB|G|2127
4V6N|1|AB|G|2128
*
4V6N|1|AB|C|2160
4V6N|1|AB|C|2161
4V6N|1|AB|G|2162
4V6N|1|AB|A|2163
4V6N|1|AB|C|2164
4V6N|1|AB|C|2165
4V6N|1|AB|U|2166
4V6N|1|AB|U|2167
4V6N|1|AB|G|2168
4V6N|1|AB|A|2169
4V6N|1|AB|A|2170
4V6N|1|AB|A|2171
4V6N|1|AB|U|2172
4V6N|1|AB|A|2173
4V6N|1|AB|C|2174

Current chains

Chain AB

23S ribosomal RNA

Nearby chains

Chain AC

50S ribosomal protein L1