IL_4V6N_203

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

4V6N|1|BA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|BA|U|409
4V6N|1|BA|G|410
4V6N|1|BA|A|411
4V6N|1|BA|A|412
4V6N|1|BA|G|413
4V6N|1|BA|A|414
4V6N|1|BA|A|415
4V6N|1|BA|G|416
*
4V6N|1|BA|U|427
4V6N|1|BA|G|428
4V6N|1|BA|U|429
4V6N|1|BA|A|430
4V6N|1|BA|A|431
4V6N|1|BA|A|432
4V6N|1|BA|G|433

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BG

30S ribosomal protein S4