IL_4V6O_102
3D structure
- PDB id
- 4V6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14.7 Å
Loop
- Sequence
- GU*ACU
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6O_102 not in the Motif Atlas
- Geometric match to IL_4V88_412
- Geometric discrepancy: 0.2997
- The information below is about IL_4V88_412
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
4V6O|1|BB|G|883
4V6O|1|BB|U|884
*
4V6O|1|BB|A|892
4V6O|1|BB|C|893
4V6O|1|BB|U|894
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain AB
- Transfer RNA; tRNA
Coloring options: