IL_4V6O_137

3D structure

PDB id

4V6O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

14.7 Å

Loop

Sequence

UGAGGUC*GAUGGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6O|1|BB|U|1720
4V6O|1|BB|G|1721
4V6O|1|BB|A|1722
4V6O|1|BB|G|1723
4V6O|1|BB|G|1724
4V6O|1|BB|U|1725
4V6O|1|BB|C|1726
*
4V6O|1|BB|G|1734
4V6O|1|BB|A|1735
4V6O|1|BB|U|1736
4V6O|1|BB|G|1737
4V6O|1|BB|G|1738
4V6O|1|BB|A|1739
4V6O|1|BB|G|1740

Current chains

Chain BB

23S ribomosomal RNA

Nearby chains