IL_4V6O_151
3D structure
- PDB id
- 4V6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14.7 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6O_151 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.2961
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V6O|1|BB|C|2103
4V6O|1|BB|C|2104
4V6O|1|BB|U|2105
*
4V6O|1|BB|A|2184
4V6O|1|BB|U|2185
4V6O|1|BB|G|2186
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L1
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