IL_4V6O_189

3D structure

PDB id

4V6O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

14.7 Å

Loop

Sequence

GGC*GUCAUC

Length

9 nucleotides

Bulged bases

4V6O|1|AA|C|1200, 4V6O|1|AA|A|1201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6O|1|AA|G|1057
4V6O|1|AA|G|1058
4V6O|1|AA|C|1059
*
4V6O|1|AA|G|1198
4V6O|1|AA|U|1199
4V6O|1|AA|C|1200
4V6O|1|AA|A|1201
4V6O|1|AA|U|1202
4V6O|1|AA|C|1203

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

Transfer RNA; tRNA

Chain AC

mRNA

Chain AF

30S ribosomal protein S3

Chain AM

30S ribosomal protein S10

Chain AQ

30S ribosomal protein S14