IL_4V6O_198
3D structure
- PDB id
- 4V6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14.7 Å
Loop
- Sequence
- UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA
- Length
- 34 nucleotides
- Bulged bases
- 4V6O|1|BB|G|1026, 4V6O|1|BB|A|1127, 4V6O|1|BB|U|1130, 4V6O|1|BB|A|1134, 4V6O|1|BB|A|1143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6O|1|BB|U|1018
4V6O|1|BB|U|1019
4V6O|1|BB|A|1020
4V6O|1|BB|A|1021
4V6O|1|BB|G|1022
4V6O|1|BB|U|1023
4V6O|1|BB|G|1024
4V6O|1|BB|G|1025
4V6O|1|BB|G|1026
4V6O|1|BB|A|1027
4V6O|1|BB|A|1028
4V6O|1|BB|A|1029
4V6O|1|BB|C|1030
*
4V6O|1|BB|G|1124
4V6O|1|BB|G|1125
4V6O|1|BB|A|1126
4V6O|1|BB|A|1127
4V6O|1|BB|G|1128
4V6O|1|BB|A|1129
4V6O|1|BB|U|1130
4V6O|1|BB|G|1131
4V6O|1|BB|U|1132
4V6O|1|BB|A|1133
4V6O|1|BB|A|1134
4V6O|1|BB|C|1135
4V6O|1|BB|G|1136
4V6O|1|BB|G|1137
4V6O|1|BB|G|1138
4V6O|1|BB|G|1139
4V6O|1|BB|C|1140
4V6O|1|BB|U|1141
4V6O|1|BB|A|1142
4V6O|1|BB|A|1143
4V6O|1|BB|A|1144
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain B7
- 50S ribosomal protein L36
- Chain BE
- 50S ribosomal protein L3
- Chain BH
- 50S ribosomal protein L6
- Chain BL
- 50S ribosomal protein L13
- Chain BO
- 50S ribosomal protein L16
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