IL_4V6P_020
3D structure
- PDB id
- 4V6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- CAG*CAGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6P_020 not in the Motif Atlas
- Geometric match to IL_4PDB_001
- Geometric discrepancy: 0.3495
- The information below is about IL_4PDB_001
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_36516.3
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
4V6P|1|AA|C|440
4V6P|1|AA|A|441
4V6P|1|AA|G|442
*
4V6P|1|AA|C|492
4V6P|1|AA|A|493
4V6P|1|AA|G|494
4V6P|1|AA|A|495
4V6P|1|AA|A|496
4V6P|1|AA|G|497
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AG
- 30S ribosomal protein S4
Coloring options: