IL_4V6P_150

3D structure

PDB id

4V6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.5 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6P|1|BB|G|2124
4V6P|1|BB|G|2125
4V6P|1|BB|A|2126
4V6P|1|BB|G|2127
4V6P|1|BB|G|2128
*
4V6P|1|BB|C|2160
4V6P|1|BB|C|2161
4V6P|1|BB|G|2162
4V6P|1|BB|A|2163
4V6P|1|BB|C|2164
4V6P|1|BB|C|2165
4V6P|1|BB|U|2166
4V6P|1|BB|U|2167
4V6P|1|BB|G|2168
4V6P|1|BB|A|2169
4V6P|1|BB|A|2170
4V6P|1|BB|A|2171
4V6P|1|BB|U|2172
4V6P|1|BB|A|2173
4V6P|1|BB|C|2174

Current chains

Chain BB

23S ribomosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L1