IL_4V6P_180
3D structure
- PDB id
- 4V6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- GCG*CGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6P_180 not in the Motif Atlas
- Geometric match to IL_5E81_401
- Geometric discrepancy: 0.236
- The information below is about IL_5E81_401
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
4V6P|1|AA|G|769
4V6P|1|AA|C|770
4V6P|1|AA|G|771
*
4V6P|1|AA|C|808
4V6P|1|AA|G|809
4V6P|1|AA|C|810
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AR
- 30S ribosomal protein S15
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
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