IL_4V6Q_013

3D structure

PDB id

4V6Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

11.5 Å

Loop

Sequence

GGGAUAAC*GCUAAUACC

Length

17 nucleotides

Bulged bases

4V6Q|1|AA|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Q|1|AA|G|146
4V6Q|1|AA|G|147
4V6Q|1|AA|G|148
4V6Q|1|AA|A|149
4V6Q|1|AA|U|150
4V6Q|1|AA|A|151
4V6Q|1|AA|A|152
4V6Q|1|AA|C|153
*
4V6Q|1|AA|G|168
4V6Q|1|AA|C|169
4V6Q|1|AA|U|170
4V6Q|1|AA|A|171
4V6Q|1|AA|A|172
4V6Q|1|AA|U|173
4V6Q|1|AA|A|174
4V6Q|1|AA|C|175
4V6Q|1|AA|C|176

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AW

30S ribosomal protein S20