IL_4V6R_181

3D structure

PDB id

4V6R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

11.5 Å

Loop

Sequence

GGAGGAAGGG*CAUUGACGUUAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6R|1|AA|G|446
4V6R|1|AA|G|447
4V6R|1|AA|A|448
4V6R|1|AA|G|449
4V6R|1|AA|G|450
4V6R|1|AA|A|451
4V6R|1|AA|A|452
4V6R|1|AA|G|453
4V6R|1|AA|G|454
4V6R|1|AA|G|455
*
4V6R|1|AA|C|477
4V6R|1|AA|A|478
4V6R|1|AA|U|479
4V6R|1|AA|U|480
4V6R|1|AA|G|481
4V6R|1|AA|A|482
4V6R|1|AA|C|483
4V6R|1|AA|G|484
4V6R|1|AA|U|485
4V6R|1|AA|U|486
4V6R|1|AA|A|487
4V6R|1|AA|C|488

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AG

30S ribosomal protein S4

Chain AS

30S ribosomal protein S16