IL_4V6S_117

3D structure

PDB id

4V6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.1 Å

Loop

Sequence

CUGCC*GAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6S|1|BA|C|132
4V6S|1|BA|U|133
4V6S|1|BA|G|134
4V6S|1|BA|C|135
4V6S|1|BA|C|136
*
4V6S|1|BA|G|227
4V6S|1|BA|A|228
4V6S|1|BA|U|229
4V6S|1|BA|G|230

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BR

30S ribosomal protein S16

Chain BV

30S ribosomal protein S20