IL_4V6S_122

3D structure

PDB id

4V6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.1 Å

Loop

Sequence

CUAGUAG*CUAGG

Length

12 nucleotides

Bulged bases

4V6S|1|BA|U|249

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6S|1|BA|C|248
4V6S|1|BA|U|249
4V6S|1|BA|A|250
4V6S|1|BA|G|251
4V6S|1|BA|U|252
4V6S|1|BA|A|253
4V6S|1|BA|G|254
*
4V6S|1|BA|C|272
4V6S|1|BA|U|273
4V6S|1|BA|A|274
4V6S|1|BA|G|275
4V6S|1|BA|G|276

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BS

30S ribosomal protein S17