IL_4V6S_138

3D structure

PDB id

4V6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.1 Å

Loop

Sequence

GUGAAAUCC*GAACUGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6S|1|BA|G|604
4V6S|1|BA|U|605
4V6S|1|BA|G|606
4V6S|1|BA|A|607
4V6S|1|BA|A|608
4V6S|1|BA|A|609
4V6S|1|BA|U|610
4V6S|1|BA|C|611
4V6S|1|BA|C|612
*
4V6S|1|BA|G|628
4V6S|1|BA|A|629
4V6S|1|BA|A|630
4V6S|1|BA|C|631
4V6S|1|BA|U|632
4V6S|1|BA|G|633
4V6S|1|BA|C|634

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BF

30S ribosomal protein S4

Chain BR

30S ribosomal protein S16

Chain BS

30S ribosomal protein S17